SO

Sequence Types and Features Ontology
  • 0
  • Alliance of Genome Resources0
  • BAC_clone0
  • DBVAR0
  • DNA_invertase_target_sequence0
  • DNA_replication_mode0
  • H3K27_acylation_site0
  • PAC_clone0
  • RNA modification0
  • RNA_polymerase_promoter0
  • RNA_replication_mode0
  • RNA_stability_element0
  • RNApol_III_promoter_type_1_region0
  • RNApol_III_promoter_type_2_region0
  • RNApol_II_promoter_region0
  • Sequence_Ontology0
  • TSS_region164748
  • YAC_clone0
  • adjacent_to4
  • alternately_spliced_gene_encoding_greater_than_one_transcript0
  • alternately_spliced_gene_encodeing_one_transcript0
  • alternatively_spliced_transcript_encoding_greater_than_1_polypeptide_different_start_codon_different_stop_codon_coding_regions_non_overlapping0
  • alternatively_spliced_gene_encoding_greater_than_1_polypeptide_coding_regions_overlapping0
  • amino acid 1 letter code0
  • amino acid 3 letter code0
  • amino acid modification0
  • associated_with0
  • assortment_derived_aneuploid0
  • assortment_derived_deficiency0
  • assortment_derived_deficiency_plus_duplication0
  • assortment_derived_duplication0
  • bacterial_RNApol_promoter_region0
  • biosapiens0
  • canonical_splice_site0
  • clone_attribute0
  • clone_insert_start0
  • cloned0
  • cloned_cDNA0
  • cloned_genomic0
  • complete_evidence_for_feature0
  • computed_feature0
  • computed_feature_by_similarity0
  • connects_on0
  • consider0
  • contained_by0
  • contains0
  • cosmid_clone0
  • covalent_binding_site0
  • cross_link0
  • database_cross_reference20388
  • dbsnp variant terms0
  • definition80435
  • delete0
  • delete_U0
  • derives_from13
  • disconnected_from0
  • disulfide_bond0
  • edit_operation0
  • edited_by_A_to_I_substitution0
  • edited_by_C_insertion_and_dinucleotide_insertion0
  • edited_by_C_to_U_substitution0
  • edited_by_G_addition0
  • edited_from0
  • edited_to0
  • eight_cutter_restriction_site0
  • end_overlapping_gene0
  • engineered_DNA0
  • enhanceosome0
  • enhancer_attribute0
  • ensembl variant terms0
  • evidence_for_feature0
  • exemplar_of0
  • finished_by0
  • finishes0
  • fosmid_clone0
  • four_cutter_restriction_site0
  • frame_restoring_sequence_variant0
  • frameshift_sequence_variation0
  • gained0
  • gene_by_genome_location0
  • gene_by_organelle_of_genome0
  • gene_by_polyadenylation_attribute0
  • gene_by_transcript_attribute0
  • gene_class0
  • gene_group_regulatory_region0
  • gene_not_polyadenylated0
  • gene_part0
  • gene_sensu_your_favorite_organism0
  • genome_of0
  • guided_by0
  • guides0
  • has_alternative_id4
  • has_broad_synonym2068
  • has_exact_synonym77804
  • has_integral_part0
  • has_narrow_synonym6969
  • has_obo_format_version0
  • has_obo_namespace0
  • has_origin0
  • has_part3
  • has_quality11
  • has_related_synonym41913
  • has_scope0
  • has_synonym_type1
  • homologous_to0
  • in_subset0
  • insert0
  • insert_AA0
  • insert_AU0
  • insert_C0
  • insert_CU0
  • insert_G0
  • insert_GC0
  • insert_GU0
  • insert_U0
  • insert_dinucleotide0
  • integral_part_of0
  • integrase_coding_region0
  • intron_attribute0
  • intronic_splicing_enhancer0
  • invert0
  • is_consecutive_sequence_of0
  • lambda_clone0
  • lost0
  • mRNA_by_polyadenylation_status0
  • mRNA_not_polyadenylated0
  • match_set0
  • maximally_overlaps0
  • member_of2
  • mutation_causing_inframe_polypeptide_N_terminal_elongation0
  • mutation_causing_out_of_frame_polypeptide_N_terminal_elongation0
  • mutation_causing_out_of_frame_polypeptide_C_terminal_elongation0
  • mutation_causing_polypeptide_C_terminal_elongation0
  • mutation_causing_polypeptide_N_terminal_elongation0
  • mutaton_causing_inframe_polypeptide_C_terminal_elongation0
  • nested_region0
  • nested_repeat0
  • nested_transposon0
  • non_canonical_splice_site0
  • non_capped_primary_transcript0
  • non_covalent_binding_site0
  • non_functional_homolog_of0
  • nuclear_mitochondrial0
  • orthologous_to0
  • overlaps3
  • paralogous_to0
  • part_of25
  • partial_evidence_for_feature0
  • phagemid_clone0
  • plasmid_clone0
  • polycistronic_gene0
  • polypeptide_post_translational_processing_affected0
  • position_of0
  • predicted_ab_initio_computation0
  • primary_transcript_attribute0
  • processed0
  • processed_from0
  • processed_into0
  • processed_transcript_attribute0
  • promoter_region0
  • pseudogene_attribute0
  • rRNA_21S0
  • rRNA_21S_gene0
  • reagent_attribute0
  • recombined_from0
  • recombined_to0
  • repeat_family0
  • repetitive_element0
  • restriction_enzyme_cut_site0
  • rolling_circle0
  • sequence variant_affecting_transcript_stability0
  • sequence_attribute7
  • sequence_collection474
  • sequence_feature275153
  • sequence_feature_locating_method0
  • sequence_of0
  • sequence_operation0
  • sequence_replication_mode0
  • sequence_variant3
  • sequence_variant_affecting_transcript_secondary_structure0
  • sequence_variant_affecting_3D_structure_of_polypeptide0
  • sequence_variant_affecting_copy_number0
  • sequence_variant_affecting_editing0
  • sequence_variant_affecting_gene_structure0
  • sequence_variant_affecting_polyadenylation0
  • sequence_variant_affecting_polypeptide_function0
  • sequence_variant_affecting_rate_of_transcription0
  • sequence_variant_affecting_regulatory_region0
  • sequence_variant_affecting_splice_acceptor0
  • sequence_variant_affecting_splice_donor0
  • sequence_variant_affecting_splicing0
  • sequence_variant_affecting_transcript_processing0
  • sequence_variant_affecting_transcription0
  • sequence_variant_affecting_translational_product0
  • sequence_variant_affecting_level_of_translational_product0
  • sequence_variant_affecting_polypeptide_amino_acid_sequence0
  • sequence_variant_causing_non_synonymous_codon_change_in_transcript0
  • sequence_variant_causing_conservative_missense_codon_change_in_transcript0
  • sequence_variant_causing_loss_of_function_of_polypeptide0
  • sequence_variant_causing_conservative_amino_acid_substitution0
  • sequence_variant_causing_nonsense_codon_change_in_transcript0
  • sequence_variant_causing_nonconservative_missense_codon_change_in_transcript0
  • sequence_variant_causing_cryptic_splice_donor_activation0
  • sequence_variant_causing_missense_codon_change_in_transcript0
  • sequence_variant_causing_plus_1_frameshift_mutation0
  • sequence_variant_causes_exon_loss0
  • sequence_variant_causes_intron_gain0
  • sequence_variant_causing_amino_acid_deletion0
  • sequence_variant_causing_amino_acid_insertion0
  • sequence_variant_causing_amino_acid_substitution0
  • sequence_variant_causing_conformational_change0
  • sequence_variant_causing_cryptic_splice_activation0
  • sequence_variant_causing_gene_fusion0
  • sequence_variant_causing_inactive_catalytic_site0
  • sequence_variant_causing_minus_1_frameshift0
  • sequence_variant_causing_minus_2_frameshift0
  • sequence_variant_causing_no_3D_structural_change0
  • sequence_variant_causing_no_change_in_transcript0
  • sequence_variant_causing_plus_2_frameshift0
  • sequence_variant_causing_polypeptide_elongation0
  • sequence_variant_causing_polypeptide_fusion0
  • sequence_variant_causing_polypeptide_truncation0
  • sequence_variant_causing_polypeptide_localization_change0
  • sequence_variant_causing_complex_change_of_translational_product0
  • sequence_variant_causing_polypeptide_post_translational_processing_change0
  • sequence_variant_causing_synonymous_codon_change_in_transcript0
  • sequence_variant_causing_compensatory_transcript_secondary_structure_mutation0
  • sequence_variant_causing_terminator_codon_change_in_transcript0
  • sequence_variant_causing_cryptic_splice_acceptor_activation0
  • sequence_variant_causing_gain_of_function_of_polypeptide0
  • sequence_variant_causing_inactive_ligand_binding_site0
  • sequence_variant_causing_nonconservative_amino_acid_substitution0
  • sequence_variant_causing_initiator_codon_change_in_transcript0
  • sequence_variant_causing_complex_3D_structural_change0
  • sequence_variant_causing_amino_acid_coding_codon_change_in_transcript0
  • sequence_variant_causing_no_change_of_translational_product0
  • sequence_variant_causing_partial_loss_of_function_of_polypeptide0
  • sequence_variant_decreasing_rate_of_transcription0
  • sequence_variant_decreasing_transcript_stability0
  • sequence_variant_decreasing_level_of_translation_product0
  • sequence_variant_effect0
  • sequence_variant_increasing_rate_of_transcription0
  • sequence_variant_increasing_transcript_stability0
  • sequence_variant_increasing_level_of_translation_product0
  • sequence_variant_obs0
  • sequence_variation_affecting_coding_sequence0
  • sequence_variation_affecting_level_of_transcript0
  • sequence_variation_affecting_reading_frame0
  • sequence_variation_affecting_transcript0
  • sequence_variation_affecting_transcript_sequence0
  • sequence_variation_decreasing_level_of_transcript0
  • sequence_variation_increasing_level_of_transcript0
  • similar_to0
  • site0
  • six_cutter_restriction_site0
  • splicing_feature0
  • started_by0
  • starts0
  • status_of_coding_sequence0
  • stop_codon_readthrough0
  • stop_codon_redefinition_as_pyrrolysine0
  • stop_codon_redefinition_as_selenocysteine0
  • subset_property119
  • substitute0
  • substitute_A_to_I0
  • substitute_C_to_U0
  • synonym_type_property46
  • term replaced by0
  • theta_replication0
  • trans_spliced_from0
  • trans_spliced_to0
  • transcribed_from0
  • transcribed_region0
  • transcribed_to0
  • transcript_edited_by_U_insertion/deletion0
  • transcript_feature0
  • transcript_sequence_variant0
  • transcript_with_readthrough_stop_codon0
  • transcription_regulatory_region0
  • transgene_attribute0
  • translates_to0
  • translation_of0
  • translocate0
  • transposable_element_attribute0
  • type_II_enzyme_restriction_site0
  • type_I_enzyme_restriction_site0
  • unequally_crossed_over0
  • variant annotation term0
  • variant_of0
  • vertebrate_immune_system_feature0
URI
http://purl.obolibrary.org/obo/SO_0002117
Label

has_obo_namespace
sequence
http://www.geneontology.org/formats/oboInOwl#created_by
kareneilbeck
http://www.geneontology.org/formats/oboInOwl#creation_date
2016-07-18T14:27:21Z
http://www.geneontology.org/formats/oboInOwl#id
SO:0002117
http://www.w3.org/2002/07/owl#deprecated
true